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View Structure Prediction Details

Protein: XYLT_ARATH
Organism: Arabidopsis thaliana
Length: 534 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XYLT_ARATH.

Description E-value Query
Range
Subject
Range
gi|8572250 - gi|8572250|gb|AAF77064.1| beta 1,2-xylosyltransferase [Arabidopsis thaliana]
660.0 [0..1] [534..1]
gi|58696566 - gi|58696566|emb|CAF25343.1| putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum]
590.0 [0..5] [534..2]
gi|83715785 - gi|83715785|emb|CAJ47423.1| Beta-1,2-xylosyltransferase [Solanum tuberosum]
575.0 [0..16] [534..13]
gi|34499919 - gi|34499919|gb|AAQ73546.1| beta 1,2 xylosyltransferase [Medicago sativa]
574.0 [0..7] [534..3]
gi|83715781 - gi|83715781|emb|CAJ47421.1| Beta-1,2-xylosyltransferase [Hordeum vulgare]
568.0 [0..3] [534..13]
gi|55956968 - gi|55956968|emb|CAI11448.1| beta-2-xylosyltransferase [Saccharum officinarum]
561.0 [0..15] [534..24]
gi|68303942 - gi|68303942|gb|AAY89657.1| beta 1,2-xylosyltransferase [Zea mays]
561.0 [0..17] [534..26]
gi|42408140, gi|... - gi|50947387|ref|XP_483221.1| putative beta 1,2-xylosyltransferase [Oryza sativa (japonica cultivar-g...
548.0 [0..4] [534..20]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRNPKILK IFLYMLLLNS LFLIIYFVFH SSSFSPEQSQ PPHIYHVSVN NQSAIQKPWP  60
   61 ILPSYLPWTP PQRNLPTGSC EGYFGNGFTK RVDFLKPRIG GGGEGSWFRC FYSETLQSSI 120
  121 CEGRNLRMVP DRIVMSRGGE KLEEVMGRKE EEELPAFRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAFEVAEEVS SRLGFKRHRR FGGGEGGSAV SRRLVNDEML NEYMQEGGID RHTMRDLVAS  60
   61 IRAVDTNDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.863 N/A N/A a.60.2 RuvA domain 2-like

Predicted Domain #3
Region A:
Residues: [229-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VCEEWVEEPT LLVTRFEYAN LFHTVTDWYS AYVSSRVTGL PNRPHVVFVD GHCTTQLEET  60
   61 WTALFSGIRY AKNFTKPVCF RHAILSPLGY ETALFKGLSG EIDCKGDSAH NLWQNPDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.882 c.13.2 Anti-sigma factor antagonist SpoIIaa

Predicted Domain #4
Region A:
Residues: [347-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRTARISEFG EMIRAAFGLP VNRHRSLEKP LSSSSSSASV YNVLFVRRED YLAHPRHGGK  60
   61 VQSRLINEEE VFDSLHHWVA TGSTGLTKCG INLVNGLLAH MSMKDQVRAI QDASVIIGAH 120
  121 GAGLTHIVSA TPNTTIFEII SVEFQRPHFE LIAKWKGLEY HAMHLANSRA EPTAVIEKLT 180
  181 EIMKSLGC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle