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View Structure Prediction Details

Protein: XTH6_ARATH
Organism: Arabidopsis thaliana
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537188 - gi|21537188|gb|AAM61529.1| xyloglucan endo-transglycosylase-like protein [Arabidopsis thaliana]
346.0 [0..1] [292..1]

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Predicted Domain #1
Region A:
Residues: [1-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKIYSPSFP GTLCLCIFTL LTLMFIRVSA RPATFVEDFK AAWSESHIRQ MEDGKAIQLV  60
   61 LDQSTGCGFA SKRKYLFGRV SMKIKLIPGD SAGTVTAFYM NSDTATVRDE LDFEFLGNRS 120
  121 GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE 180
  181 AKNIAYPTSQ PMGVYSTLWE ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC 240
  241 PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.045757
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle