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View Structure Prediction Details

Protein: XTH5_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH5_ARATH.

Description E-value Query
Range
Subject
Range
gi|113869744, gi... - gi|87241320|gb|ABD33178.1| Glycoside hydrolase, family 16; Xyloglucan endo-transglycosylase, C-termi...
362.0 [0..1] [293..1]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK  60
   61 YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ NSEHDEIDFE FLGNRTGQPY 120
  121 ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV 180
  181 KFPFNQPMKI YSSLWNADDW ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ 240
  241 GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.045757
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle