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View Structure Prediction Details

Protein: XTH23_ARATH
Organism: Arabidopsis thaliana
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH23_ARATH.

Description E-value Query
Range
Subject
Range
gi|17064792, gi|... - gi|20259808|gb|AAM13251.1| xyloglucan endo-1, 4-beta-D-glucanase [Arabidopsis thaliana], gi|17064792...
349.0 [0..1] [286..1]

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Predicted Domain #1
Region A:
Residues: [1-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF  60
   61 QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE IDFEFLGNLS GDPYTLHTNV 120
  121 FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ 180
  181 PMRMYSSLWN AEEWATRGGL VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST 240
  241 GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle