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View Structure Prediction Details

Protein: XTH21_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH21_ARATH.

Description E-value Query
Range
Subject
Range
gi|115334954 - gi|115334954|gb|ABI94063.1| xyloglucan endotransglucosylase/hydrolase 3 [Cucumis melo]
334.0 [0..1] [299..1]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS  60
   61 GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW DEIDFEFLGN VSGDPYIVHT 120
  121 NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK 180
  181 NQPMRMYGSL WNADDWATRG GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS 240
  241 PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN 300
  301 KNTKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.522879
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle