| Protein: | WRK42_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 528 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WRK42_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..1] | [509..1] |
|
|
310.0 | [0..21] | [526..77] |
|
|
308.0 | [0..22] | [503..61] |
|
|
304.0 | [0..22] | [503..51] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV 60
61 KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.344 | c.15.1 | BRCT domain |
|
Region A: Residues: [101-155] |
1 11 21 31 41 51
| | | | | |
1 SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQ
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-252] |
1 11 21 31 41 51
| | | | | |
1 EDHHHLATTE NNDNVKNRHE VPEMVPRQFI DLGPHSDEVS SEERTTVRSG SPPSLLEKSS 60
61 SRQNGKRVLV REESPETESN GWRNPNKVPK HHASSSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.301 | a.134.1 | Fungal elicitin |
| View | Download | 0.248 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.232 | a.1.1 | Globin-like |
| View | Download | 0.232 | a.1.1 | Globin-like |
| View | Download | 0.231 | a.39.1 | EF-hand |
| View | Download | 0.228 | a.8.4 | Description not found. |
| View | Download | 0.221 | a.228.1 | Description not found. |
|
Region A: Residues: [253-351] |
1 11 21 31 41 51
| | | | | |
1 CGGNGSENAS SKVIEQAAAE ATMRKARVSV RARSEAPMLS DGCQWRKYGQ KMAKGNPCPR 60
61 AYYRCTMAVG CPVRKQVQRC AEDRTILITT YEGNHNHPL
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-528] |
1 11 21 31 41 51
| | | | | |
1 PPAAMNMAST TTAAASMLLS GSTMSNQDGL MNPTNLLART ILPCSSSMAT ISASAPFPTI 60
61 TLDLTESPNG NNPTNNPLMQ FSQRSGLVEL NQSVLPHMMG QALYYNQQSK FSGLHMPSQP 120
121 LNAGESVSAA TAAIASNPNF AAALAAAITS IINGSNNQQN GNNNNSNVTT SNVDNRQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
