| Protein: | WRK38_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WRK38_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..3] | [289..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES FSNAISILSA 60
61 KPETEDDQFS DLSSRDSSPP PQGSPSKKRK ID
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.371 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.299 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.256 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.247 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.245 | a.24.3 | Cytochromes |
|
Region A: Residues: [93-209] |
1 11 21 31 41 51
| | | | | |
1 STNSSENWRD DSPDPIYYDG YLWRKYGQKS IKKSNHQRSY YRCSYNKDHN CEARKHEQKI 60
61 KDNPPVYRTT YFGHHTCKTE HNLDAIFIAG QDPLDDFKST QMIRFGKDQD QEKESRS
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-289] |
1 11 21 31 41 51
| | | | | |
1 NGFSLSVKHE EDIIKEQAID QYREITSNDQ DCQDVIEEYL SSPSGSYPPS SSSGSESADF 60
61 NSDLLFDNPD SWDRYDQFYF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
