| Protein: | VPEB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPEB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
669.0 | [0..16] | [486..15] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MAKSCYFRPA LLLLLVLLVH AESRGRFEPK ILMPTEEANP ADQDEDGVGT RWAVLVAGSS 60
61 GYGNYRHQAD VCHAYQILRK GGLKEENIVV LMYDDIANHP LNPRPGTLIN HPDGDDVYAG 120
121 VPKDYTGSSV TAANFYAVLL GDQKAVKGGS GKVIASKPND HIFVYYADHG GPGVLGMPNT 180
181 PHIYAADFIE TLKKKHASGT YKEMVIYVEA CESGSIFEGI MPKDLNIYVT TASNAQESSY 240
241 GTYCPGMNPS PPSEYITCLG DLYSVAWMED SETHNLKKET IKQQYHTVKM RTSNYNTYSG 300
301 GSHVMEYGNN SIKSEKLYLY QGFDPA
|
| Detection Method: |  |
| Confidence: | 1.62 |
| Match: | 1i4eB |
| Description: | Caspase-8 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-486] |
1 11 21 31 41 51
| | | | | |
1 TVNLPLNELP VKSKIGVVNQ RDADLLFLWH MYRTSEDGSR KKDDTLKELT ETTRHRKHLD 60
61 ASVELIATIL FGPTMNVLNL VREPGLPLVD DWECLKSMVR VFEEHCGSLT QYGMKHMRAF 120
121 ANVCNNGVSK ELMEEASTAA CGGYSEARYT VHPSILGYSA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
