| Protein: | VPEA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 478 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPEA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
691.0 | [0..5] | [478..7] |
|
Region A: Residues: [1-313] |
1 11 21 31 41 51
| | | | | |
1 MTTVVSFLAL FLFLVAAVSG DVIKLPSLAS KFFRPTENDD DSTKWAVLVA GSSGYWNYRH 60
61 QADVCHAYQL LKKGGVKEEN IVVFMYDDIA KNEENPRPGV IINSPNGEDV YNGVPKDYTG 120
121 DEVNVDNLLA VILGNKTALK GGSGKVVDSG PNDHIFIYYS DHGGPGVLGM PTSPNLYAND 180
181 LNDVLKKKYA SGTYKSLVFY LEACESGSIF EGLLPEGLNI YATTASNAEE SSWGTYCPGE 240
241 DPSPPSEYET CLGDLYSVAW IEDSEKHNLQ TETLHEQYEL VKKRTAGSGK SYGSHVMEFG 300
301 DIGLSKEKLV LFM
|
| Detection Method: |  |
| Confidence: | 1.61 |
| Match: | 1i4eB |
| Description: | Caspase-8 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [314-478] |
1 11 21 31 41 51
| | | | | |
1 GTNPADENFT FVNENSIRPP SRVTNQRDAD LVHFWHKYQK APEGSARKVE AQKQVLEAMS 60
61 HRLHVDNSIL LIGILLFGLE GHAVLNKVRP SGEPLVDDWD CLKSLVRAFE RHCGSLSQYG 120
121 IKHMRSIANM CNAGIQMRQM EEAAMQACPT IPTSPWSSLD RGFSA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
