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View Structure Prediction Details

Protein: VP26B_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VP26B_ARATH.

Description E-value Query
Range
Subject
Range
gi|157104579, gi... - gi|157104579|ref|XP_001648475.1| vacuolar protein sorting 26, vps26 [Aedes aegypti], gi|108869177|gb...
403.0 [0..8] [301..15]

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Predicted Domain #1
Region A:
Residues: [1-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLGAFKP ACNISITFSD GKNRKQVPMK KENGQTALVP LFHSQDTISG KVCIEPYQGK  60
   61 KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VRELDVPGEI YERKTYPFEF PTVEMPYETY 120
  121 NGVNVRLRYV LKVTVTRGYA GSILEYQELV VRNYAPLPDI NNSIKMEVGI EDCLHIEFEY 180
  181 NKSKYHLKDV ILGKIYFLLV RIKMKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGTP 240
  241 VRGESIPVRL FLAPYDLTPT HRNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKED 300
  301 ASS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2fauA
Description: No description for 2fauA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle