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View Structure Prediction Details

Protein: VATB1_ARATH
Organism: Arabidopsis thaliana
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VATB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15425560 - gi|15425560|emb|CAC60400.1| ATP synthase beta subunit [Brunonia australis]
562.0 [0..10] [476..7]

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Predicted Domain #1
Region A:
Residues: [1-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTNDLDIEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE  60
   61 VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML GRIFNGSGKP IDNGPPILPE 120
  121 AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR 180
  181 QAGLVKRLEK TVDLLEDHGE DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA 240
  241 NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP 300
  301 GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH 360
  361 NRQIYPPINV LPSLSRLMKS AIGEGMTRKD HSDVSNQLYA NYAIGKDVQA MKAVVGEEAL 420
  421 SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY 480
  481 SRDSTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2c61A
Description: No description for 2c61A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle