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View Structure Prediction Details

Protein: CBSX3_ARATH
Organism: Arabidopsis thaliana
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBSX3_ARATH.

Description E-value Query
Range
Subject
Range
gi|108710960 - gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa (japonica cultiva...
141.0 [0..1] [206..26]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGVIRSFVS GGNVVKGSVL QHLRVINPAI QPSVFCSRSE STQPARMEES GFESTTISDV  60
   61 MKSKGKSADG SWLWCTTDDT VYDAVKSMTQ HNVGALVVVK PGEQQALAGI ITERDYLRKI 120
  121 IVQGRSSKST KVGDIMTEEN KLITVTPETK VLRAMQLMTD NRIRHIPVIK DKGMIGMVSI 180
  181 GDVVRAVVHE HREELQRLNA YIQGGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1vrdA
Description: Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle