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View Structure Prediction Details

Protein: MORF8_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MORF8_ARATH.

Description E-value Query
Range
Subject
Range
MORF5_ARATH - Multiple organellar RNA editing factor 5, mitochondrial OS=Arabidopsis thaliana GN=MORF5 PE=2 SV=1
236.0 [0..5] [236..4]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV  60
   61 SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW LVVVEPPQGE PTRDEIIDSY 120
  121 IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.705 d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain
View Download 0.403 d.118.1 N-acetylmuramoyl-L-alanine amidase-like
View Download 0.391 d.24.1 Pili subunits
View Download 0.387 a.118.8 TPR-like
View Download 0.385 a.118.9 ENTH/VHS domain

Predicted Domain #2
Region A:
Residues: [171-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPDSYLDVRN KDYGGEPFID GKAVPYDPKY HEEWIRNNAR ANERNRRNDR PRNNDRSRNF  60
   61 ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG 120
  121 GPRHPPPYGA PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA 180
  181 VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle