| Protein: | TT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 258 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
184.0 | [0..1] | [211..1] |
|
|
183.0 | [0..5] | [257..3] |
|
|
182.0 | [0..1] | [155..1] |
|
|
182.0 | [0..1] | [256..1] |
|
|
182.0 | [0..5] | [257..3] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK 60
61 NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG RTDNEIKNHW NSNLRKRLPK 120
121 TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG 180
181
|
| Detection Method: |  |
| Confidence: | 35.30103 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [181-258] |
1 11 21 31 41 51
| | | | | |
1 SSLMGDLEFD FDRIHSEFHF PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF 60
61 TSCHHRGDDE DWLRDFTC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.500 | a.65.1 | Annexin |
| View | Download | 0.500 | a.65.1 | Annexin |
| View | Download | 0.456 | a.159.5 | Description not found. |
| View | Download | 0.411 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.401 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.397 | a.159.2 | FF domain |
| View | Download | 0.368 | a.4.1 | Homeodomain-like |
| View | Download | 0.327 | a.3.1 | Cytochrome c |
| View | Download | 0.278 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.213 | a.159.5 | Description not found. |
| View | Download | 0.204 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
