| Protein: | TMK1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 942 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for TMK1_ARATH.
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Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MKKRRTFLLF SFTFLLLLSL SKADSDGDLS AMLSLKKSLN PPSSFGWSDP DPCKWTHIVC 60
61 TGTKRVTRIQ IGHSGLQGTL SPDLRNLSEL ERLELQWNNI SGPVPSLSGL ASLQVLMLSN 120
121 NNFDSIPSDV FQGLTSLQSV EIDNNPFKSW EIPESLRNAS ALQNFSANSA NVSGSLPGFL 180
181 GPDEFPGLSI LHLAFNNLEG ELPMSLAGSQ VQSLWLNGQK LTGDITVLQN MTGLKEVWLH 240
241 SNKFSGPLPD FSGLKELESL SLRDNSFTGP VPASLLSLES LKVVNLTNNH LQGPVPVFKS 300
301 SVSVDLDKDS NSFCLSSPGE CDPRVKSLLL IA
|
| Detection Method: |  |
| Confidence: | 31.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [333-576] |
1 11 21 31 41 51
| | | | | |
1 SSFDYPPRLA ESWKGNDPCT NWIGIACSNG NITVISLEKM ELTGTISPEF GAIKSLQRII 60
61 LGINNLTGMI PQELTTLPNL KTLDVSSNKL FGKVPGFRSN VVVNTNGNPD IGKDKSSLSS 120
121 PGSSSPSGGS GSGINGDKDR RGMKSSTFIG IIVGSVLGGL LSIFLIGLLV FCWYKKRQKR 180
181 FSGSESSNAV VVHPRHSGSD NESVKITVAG SSVSVGGISD TYTLPGTSEV GDNIQMVEAG 240
241 NMLI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [577-942] |
1 11 21 31 41 51
| | | | | |
1 SIQVLRSVTN NFSSDNILGS GGFGVVYKGE LHDGTKIAVK RMENGVIAGK GFAEFKSEIA 60
61 VLTKVRHRHL VTLLGYCLDG NEKLLVYEYM PQGTLSRHLF EWSEEGLKPL LWKQRLTLAL 120
121 DVARGVEYLH GLAHQSFIHR DLKPSNILLG DDMRAKVADF GLVRLAPEGK GSIETRIAGT 180
181 FGYLAPEYAV TGRVTTKVDV YSFGVILMEL ITGRKSLDES QPEESIHLVS WFKRMYINKE 240
241 ASFKKAIDTT IDLDEETLAS VHTVAELAGH CCAREPYQRP DMGHAVNILS SLVELWKPSD 300
301 QNPEDIYGID LDMSLPQALK KWQAYEGRSD LESSTSSLLP SLDNTQMSIP TRPYGFAESF 360
361 TSVDGR
|
| Detection Method: | |
| Confidence: | 68.221849 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
