| Protein: | TLC2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 618 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TLC2_ARATH.
| Description | E-value | Query Range |
Subject Range |
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406.0 | [0..1] | [605..1] |
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380.0 | [0..1] | [614..1] |
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370.0 | [0..1] | [617..1] |
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366.0 | [0..1] | [615..1] |
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Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MEGLIQTRGI LSLPAKPIGV RRLLQPSHGL KQRLFTTNLP ALSLSSNGHK KFQAFQQIPL 60
61 GISVSHKERS RGFICKAEAA AAGGGNVFDE GDTAAMAVSP KIFGV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.477 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.237 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.236 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.206 | d.58.4 | Dimeric alpha+beta barrel |
|
Region A: Residues: [106-618] |
1 11 21 31 41 51
| | | | | |
1 EVTTLKKIVP LGLMFFCILF NYTILRDTKD VLVVTAKGSS AEIIPFLKTW VNLPMAIGFM 60
61 LLYTKLSNVL SKKALFYTVI VPFIVYFGAF GFVMYPLSNL IHPEALADKL LATLGPRFMG 120
121 PLAIMRIWSF CLFYVMAELW GSVVVSVLFW GFANQITTVD EAKKFYPLFG LGANVALIFS 180
181 GRTVKYFSNM RKNLGPGVDG WAVSLKAMMS IVVGMGLAIC FLYWWVNRYV PLPTRSKKKK 240
241 VKPQMGTMES LKFLVSSPYI RDLATLVVAY GISINLVEVT WKSKLKAQFP SPNEYSAFMG 300
301 DFSTCTGIAT FTMMLLSQYV FKKYGWGVAA KITPTVLLLT GVAFFSLILF GGPFAPLVAK 360
361 LGMTPLLAAV YVGALQNIFS KSAKYSLFDP CKEMAYIPLD EDTKVKGKAA IDVVCNPLGK 420
421 SGGALIQQFM ILTFGSLANS TPYLGVILLG IVTAWLAAAK SLEGQFNTLM SEEELEREME 480
481 RASSVKIPVV SQEDAPSGET TSQLSEKSTP TGI
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| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
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