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View Structure Prediction Details

Protein: TIP41_ARATH
Organism: Arabidopsis thaliana
Length: 249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP41_ARATH.

Description E-value Query
Range
Subject
Range
gi|115459788, gi... - gi|50927737|ref|XP_473424.1| OSJNBb0034G17.15 [Oryza sativa (japonica cultivar-group)], gi|38605857|...
243.0 [0..1] [242..1]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH  60
   61 AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY WIDQLLASSA ACFLLSYLTG 120
  121 GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN 180
  181 ILAGGAFSGA SMNPARSFGP ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV 240
  241 ADDEQPLLN

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Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle