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View Structure Prediction Details

Protein: TIP32_ARATH
Organism: Arabidopsis thaliana
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP32_ARATH.

Description E-value Query
Range
Subject
Range
gi|115459788, gi... - gi|50927737|ref|XP_473424.1| OSJNBb0034G17.15 [Oryza sativa (japonica cultivar-group)], gi|38605857|...
248.0 [0..8] [252..3]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT  60
   61 NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA LIGGRISVIR AIYYWVAQLI 120
  121 GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG 180
  181 IIAPLAIGLI VGANILVGGP FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL 240
  241 IYEYMIIPSV NEPPHHSTHQ PLAPEDY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.045757
Match: 2b5fA
Description: Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle