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View Structure Prediction Details

Protein: TIP21_ARATH
Organism: Arabidopsis thaliana
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP21_ARATH.

Description E-value Query
Range
Subject
Range
gi|115459788, gi... - gi|50927737|ref|XP_473424.1| OSJNBb0034G17.15 [Oryza sativa (japonica cultivar-group)], gi|38605857|...
260.0 [0..1] [243..1]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA  60
   61 VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT GVFYWIAQLL GSTAACFLLK 120
  121 YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI 180
  181 VGANILAAGP FSGGSMNPAR SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS 240
  241 EHVPLASADF 

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Detection Method: PSI-BLAST
Confidence: 57.0
Match: 2b5fA
Description: Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle