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View Structure Prediction Details

Protein: TGA3_ARATH
Organism: Arabidopsis thaliana
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TGA3_ARATH.

Description E-value Query
Range
Subject
Range
TGA1_ARATH - Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2
406.0 [0..7] [384..2]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMMSSSSST TQVVSFRDMG MYEPFQQLSG WESPFKSDIN NITSNQNNNQ SSSTTLEVDA  60
   61 RPEADDNNRV NYTSVYNNSL EAEPSSNNDQ DEDRINDKMK RRLAQNREAA RKSRLRKKAH 120
  121 VQQLEESRLK LSQLEQELVR ARQQGLCVRN SSDTSYLGPA GNMNSGIAAF EMEYTHWLEE 180
  181 QNRRVSEIRT ALQAHIGDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [200-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELKMLVDSCL NHYANLFRMK ADAAKADVFF LMSGMWRTST ERFFQWIGGF RPSELLNVVM  60
   61 PYVEPLTDQQ LLEVRNLQQS SQQAEEALSQ GLDKLQQGLV ESIAIQIKVV ESVNHGAPMA 120
  121 SAMENLQALE SFVNQADHLR QQTLQQMSKI LTTRQAARGL LALGEYFHRL RALSSLWAAR 180
  181 PREHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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