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View Structure Prediction Details

Protein: TBG1_ARATH
Organism: Arabidopsis thaliana
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBG1_ARATH.

Description E-value Query
Range
Subject
Range
gi|48095525 - gi|48095525|ref|XP_392313.1| PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellif...
581.0 [0..3] [463..2]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPREIITLQV GQCGNQIGME FWKQLCLEHG ISKDGILEDF ATQGGDRKDV FFYQADDQHY  60
   61 IPRALLIDLE PRVINGIQNG DYRNLYNHEN IFVADHGGGA GNNWASGYHQ GKGVEEEIMD 120
  121 MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD 180
  181 VVVQPYNSLL TLKRLTLNAD CVVVLDNTAL GRIAVERLHL TNPTFAQTNS LVSTVMSAST 240
  241 TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT 300
  301 KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IEWGPASIQV 360
  361 ALSKKSPYVQ TAHRVSGLML ASHTSIRHLF SKCLSQYDKL RKKQAFLDNY RKFPMFADND 420
  421 LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPEQLMTG EGNASGVVDP KLAF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 137.0
Match: 1z5vA
Description: Crystal structure of human gamma-tubulin bound to GTPgammaS
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle