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View Structure Prediction Details

Protein: TBB7_ARATH
Organism: Arabidopsis thaliana
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBB7_ARATH.

Description E-value Query
Range
Subject
Range
gi|157767470 - gi|157767470|ref|XP_001667215.1| Hypothetical protein CBG16137 [Caenorhabditis briggsae AF16]
tbb-4 - tubulin beta chain status:Partially_confirmed UniProt:P41937 protein_id:CAA86310.1
gi|39596183, gi|... - gi|39596183|emb|CAE69820.1| Hypothetical protein CBG16137 [Caenorhabditis briggsae], gi|187026681|em...
603.0 [0..1] [444..1]

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Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREILHIQGG QCGNQIGSKF WEVVNLEHGI DQTGRYVGDS ELQLERVNVY YNEASCGRYV  60
   61 PRAVLMDLEP GTMDSVRSGP YGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELIDSVLDVV 120
  121 RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMMTFSVF PSPKVSDTVV 180
  181 EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLSTP SFGDLNHLIS ATMSGVTCCL 240
  241 RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRNLTVPELT QQMWDAKNMM 300
  301 CAADPRHGRY LTASAMFRGK MSTKEVDEQM LNVQNKNSSY FVEWIPNNVK STVCDIPPTG 360
  361 LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420
  421 EYQQYQDATA DEEGEYEEEE AEYEQEETY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 169.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle