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View Structure Prediction Details

Protein: SYEM_ARATH
Organism: Arabidopsis thaliana
Length: 570 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYEM_ARATH.

Description E-value Query
Range
Subject
Range
gi|21387183, gi|... - gi|21387183|gb|AAM47995.1| glutamate-tRNA ligase [Arabidopsis thaliana], gi|17064968|gb|AAL32638.1| ...
466.0 [0..1] [570..1]

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Predicted Domain #1
Region A:
Residues: [1-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLVYGTPW LRVRSLPELA PAFLRRRQSS LFYCSRRSFA VVACSTPVNN GGSVRVRFAP  60
   61 SPTGNLHVGG ARTALFNYLF ARSKGGKFVL RIEDTDLERS TRESEAAVLQ DLSWLGLDWD 120
  121 EGPGVSGDFG PYRQSERNAL YKQYAEKLLE SGHVYRCFCS SEELVKMKEN AKLKQLPPVY 180
  181 TGKWATASDA EIEQELEKGT PFTYRFRVPK EGSLKINDLI RGEVCWNLDT LGDFVVMRSN 240
  241 GQPVYNFCVT VDDATMAISH VIRAEEHLPN TLRQALIYKA LKFPMPQFAH VSLILAPDRS 300
  301 KLSKRHGATS VGQYREMGYL PQGMVNYLAL LGWGDGTENE FFTLEDLVEK FSIERVNKSG 360
  361 AIFDSTKLRW MNGQHLRALP NEKLTKLVGE RWKSAGILTE SEGSFVNEAV ELLKDGIELV 420
  421 TDSDKVLLNL LSYPLHATLA SPEAKPAVED KLHEVAASLI AAYDSGEIPS ALEEGQGAWQ 480
  481 KWVKAFGKSL KRKGKSLFMP LRVLLTGKLH GPEMGTSIVL IYKAGSPGIV VPQAGFVSME 540
  541 ERFKILREID WEALNKDESV PLESTATVST 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.69897
Match: 2o5rA
Description: No description for 2o5rA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle