| Protein: | SYP41_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP41_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..1] | [298..1] |
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MATRNRTLLF RKYRNSLRSV RAPLSSSSLT GTRSGGVGPV IEMASTSLLN PNRSYAPIST 60
61 EDPGTSSKGA ITVGLPPAWV DVSEEISVNI QRARTKMAEL GKAHAKALMP SFGDGKEDQH 120
121 NIESLTQEIT FLLKKSEKQL QRLSASGPSE DSNVRKNVQR SLATDLQLLS MELRKKQSTY 180
181 LKRLRQQKED GMDLEMNLSR NRYRPEEDDF GDMLNEHQMS KIKKSEEVSV EREKEIQQVV 240
241 ESVNDLAQIM KDLSALVIDQ GTIVDRIDYN IENVATTVED GLKQLQKAER TQRHGGMVKC 300
301 ASVLVILCFI MLLLLILKEI FL
|
| Detection Method: |  |
| Confidence: | 31.39794 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
