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View Structure Prediction Details

Protein: SUVH1_ARATH
Organism: Arabidopsis thaliana
Length: 670 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|222632057, gi... - gi|50931865|ref|XP_475460.1| 'unknown protein, conatins SET domain' [Oryza sativa (japonica cultivar...
606.0 [0..1] [669..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA  60
   61 NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV TPLRSFRSPD VSNGNAELEG 120
  121 STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DALRRRFAQL EDAKEAVSGI IKRPDLKSGS TCMGRGVRTN TKKRPGIVPG VEIGDVFFFR  60
   61 FEMCLVGLHS PSMAGIDYLV VKGETEEEPI ATSIVSSGYY DNDEGNPDVL IYTGQGGNAD 120
  121 KDKQSSDQKL ERGNLALEKS LRRDSAVRVI RGLKEASHNA KIYIYDGLYE IKESWVEKGK 180
  181 SGHNTFKYKL 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 63.721246
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [356-670]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRAPGQPPAF ASWTAIQKWK TGVPSRQGLI LPDMTSGVES IPVSLVNEVD TDNGPAYFTY  60
   61 STTVKYSESF KLMQPSFGCD CANLCKPGNL DCHCIRKNGG DFPYTGNGIL VSRKPMIYEC 120
  121 SPSCPCSTCK NKVTQMGVKV RLEVFKTANR GWGLRSWDAI RAGSFICIYV GEAKDKSKVQ 180
  181 QTMANDDYTF DTTNVYNPFK WNYEPGLADE DACEEMSEES EIPLPLIISA KNVGNVARFM 240
  241 NHSCSPNVFW QPVSYENNSQ LFVHVAFFAI SHIPPMTELT YDYGVSRPSG TQNGNPLYGK 300
  301 RKCFCGSAYC RGSFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 2o8jA
Description: No description for 2o8jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle