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View Structure Prediction Details

Protein: SSL11_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSL11_ARATH.

Description E-value Query
Range
Subject
Range
SSL12_ARATH - Protein STRICTOSIDINE SYNTHASE-LIKE 12 OS=Arabidopsis thaliana GN=SSL12 PE=2 SV=2
212.0 [0..21] [329..19]
gi|115472621, gi... - gi|50938179|ref|XP_478617.1| putative strictosidine synthase [Oryza sativa (japonica cultivar-group)...
204.0 [0..1] [328..13]

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Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG  60
   61 KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR PAGIAFNTKT GDLYVADAAL 120
  121 GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK 180
  181 DSTGKFFKYD PSKKVVTVLM EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT 240
  241 SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG 300
  301 DTLVSEVNEY KGQLYIGALF GPFAGILKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.221849
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle