| Protein: | STM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 382 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
219.0 | [0..1] | [382..1] |
|
|
202.0 | [0..1] | [381..1] |
|
|
201.0 | [0..1] | [382..1] |
|
|
200.0 | [0..1] | [382..8] |
|
|
198.0 | [0..2] | [363..21] |
|
|
197.0 | [0..2] | [363..22] |
|
|
195.0 | [0..2] | [379..5] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MESGSNSTSC PMAFAGDNSD GPMCPMMMMM PPIMTSHQHH GHDHQHQQQE HDGYAYQSHH 60
61 QQSSSLFLQS LAPPQGTKNK VASSSSPSSC APAYSLMEIH HNEIVAGGIN PCSSSSSSAS 120
121 VKAKIMA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.506 | N/A | N/A | a.29.15 | Description not found. |
| View | Download | 0.492 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.484 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.484 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.441 | N/A | N/A | a.29.16 | Description not found. |
| View | Download | 0.423 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.420 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.415 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.410 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
|
Region A: Residues: [128-167] |
1 11 21 31 41 51
| | | | | |
1 HPHYHRLLAA YVNCQKVGAP PEVVARLEEA CSSAAAAAAS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.483 | N/A | N/A | a.10.1 | Protozoan pheromone proteins |
| View | Download | 0.465 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.465 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.465 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.465 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.403 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.403 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.343 | N/A | N/A | a.22.1 | Histone-fold |
|
Region A: Residues: [168-221] |
1 11 21 31 41 51
| | | | | |
1 MGPTGCLGED PGLDQFMEAY CEMLVKYEQE LSKPFKEAMV FLQRVECQFK SLSL
|
| Detection Method: | |
| Confidence: | 28.721246 |
| Match: | PF03791.4 |
| Description: | No description for PF03791.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.768 | N/A | N/A | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.738 | N/A | N/A | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.664 | N/A | N/A | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.589 | N/A | N/A | a.159.4 | Description not found. |
| View | Download | 0.562 | N/A | N/A | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.528 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.514 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.511 | N/A | N/A | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.479 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.293 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
|
Region A: Residues: [222-382] |
1 11 21 31 41 51
| | | | | |
1 SSPSSFSGYG ETAIDRNNNG SSEEEVDMNN EFVDPQAEDR ELKGQLLRKY SGYLGSLKQE 60
61 FMKKRKKGKL PKEARQQLLD WWSRHYKWPY PSEQQKLALA ESTGLDQKQI NNWFINQRKR 120
121 HWKPSEDMQF VVMDATHPHH YFMDNVLGNP FPMDHISSTM L
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 2dmnA |
| Description: | No description for 2dmnA was found. |
