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View Structure Prediction Details

Protein: SUT32_ARATH
Organism: Arabidopsis thaliana
Length: 646 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUT32_ARATH.

Description E-value Query
Range
Subject
Range
gi|13625941, gi|... - gi|162464404|ref|NP_001105050.1| sulfate transporter ST1 [Zea mays], gi|13625941|gb|AAK35215.1|AF355...
452.0 [0..2] [625..22]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKRASQYH QVEIPPPQPF LKSLKNTLNE ILFADDPFRR IRNESKTSKK IELGLRHVFP  60
   61 ILEWARGYSL EYLKSDVISG ITIASLAIPQ GISYAQLANL PPILGLYSSL VPPLVYAIMG 120
  121 SSRDLAVGTV AVASLLTAAM LGKEVNAVVN PKLYLHLAFT ATFFAGLMQT CLGLLRLGFV 180
  181 VEILSHAAIV GFMGGAATVV CLQQLKGLLG LHHFTHS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDIVTVLRSI FSQSHMWRWE SGVLGCCFLI FLLTTKYISK KRPKLFWISA MSPLVSVIFG  60
   61 TIFLYFLHDQ FHGIQFIGEL KKG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [301-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INPPSITHLV FTPPYVMLAL KVGIITGVIA LAEGIAVGRS FAMYKNYNID GNKEMIAFGM  60
   61 MNILGSFSSC YLTTGPFSRS AVNYNAGCKT ALSNVVMAVA VAVTLLFLTP LFFYTPLVVL 120
  121 SSIIIAAMLG LVDYEAAIHL WKLDKFDFFV CLSAYLGVVF GTIEIGLILS VGISVMRLVL 180
  181 FVGRPKIYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [490-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNIQNSEIY RNIEHYPQAI TRSSLLILHI DGPIYFANST YLRDRIGRWI DEEEDKLRTS  60
   61 GDISLQYIVL DMSAVGNIDT SGISMLEELN KILGRRELKL VIANPGAEVM KKLSKSTFIE 120
  121 SIGKERIYLT VAEAVAACDF MLHTAKPDSP VPEFNNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 1auzA
Description: SOLUTION STRUCTURE OF SPOIIAA, A PHOSPHORYLATABLE COMPONENT OF THE SYSTEM THAT REGULATES TRANSCRIPTION FACTOR SIGMA-F OF BACILLUS SUBTILIS, NMR, 24 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.23164933258149 bayes_pls_golite062009
protein binding 1.6097880273634 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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