YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SUT31_ARATH
Organism: Arabidopsis thaliana
Length: 658 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for SUT31_ARATH.

Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEDYTFPQ GAEELHRRHH TVEAPQPQPF LKSLQYSVKE TLFPDDPFRQ FKNQNASRKF  60
   61 VLGLKYFLPI FEWAPRYNLK FFKSDLIAGI TIASLAIPQG ISYAKLANLP PILGLYSSFV 120
  121 PPLVYAVLGS SRDLAVGTVA VASLLTGAML SKEVDAEKDP KLYLHLAFTA TFFAGVLEAS 180
  181 LGIFRLGFIV DFLSHATIVG FMGGAATVVS LQQLKGIFGL KHFTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STDVISVMRS VFSQTHEWRW ESGVLGCGFL FFLLSTRYFS IKKPKFFWVA AMAPLTSVIL  60
   61 GSLLVYFTHA ERHGVQVIGD LKKGLNPLSG SDLIF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [321-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSPYMSTAVK TGLITGIIAL AEGVAVGRSF AMFKNYNIDG NKEMIAFGMM NIVGSFTSCY  60
   61 LTTGPFSRSA VNYNAGCKTA MSNIVMAIAV MFTLLFLTPL FHYTPLVVLS AIIISAMLGL 120
  121 IDYQAAIHLW KVDKFDFLVC MSAYVGVVFG SVEIGLVVAV AISIARLLLF VSRPKTAVKG 180
  181 NIPN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [505-658]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMIYRNTEQY PSSRTVPGIL ILEIDAPIYF ANASYLRERI IRWIDEEEER VKQSGESSLQ  60
   61 YIILDMSAVG NIDTSGISMM VEIKKVIDRR ALKLVLSNPK GEVVKKLTRS KFIGDHLGKE 120
  121 WMFLTVGEAV EACSYMLHTF KTEPASKNEP WNNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 1sboA
Description: Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle