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View Structure Prediction Details

Protein: SR543_ARATH
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SR543_ARATH.

Description E-value Query
Range
Subject
Range
gi|54026131, gi|... - gi|54026131|ref|YP_120373.1| putative signal recognition particle protein [Nocardia farcinica IFM 10...
450.0 [0..2] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLAELGGRI TRAIQQMSNV TIIDEKALNE CLNEITRALL QSDVSFPLVK EMQSNIKKIV  60
   61 NLEDLAAGHN KRRIIEQAIF SELCKMLDPG KPAFAPKKAK ASVVMFVGLQ GAGKTTTCTK 120
  121 YAYYHQKKGY KPALVCADTF RAGAFDQLKQ NATKAKIPFY GSYTESDPVK IAVEGVDTFK 180
  181 KENCDLIIVD TSGRHKQEAS LFEEMRQVAE ATKPDLVIFV MDSSIGQAAF DQAQAFKQSV 240
  241 AVGAVIITKM DGHAKGGGAL SAVAATKSPV IFIGTGEHMD EFEVFDVKPF VSRLLGMGDW 300
  301 SGFVDKLQEV VPKDQQPELL EKLSQGNFTL RIMYDQFQNI LNMGPLKEVF SMLPGISAEM 360
  361 MPKGHEKESQ AKIKRYMTMM DSMTNDELDS SNPKVFNESR MMRIARGSGR QVREVMEMLE 420
  421 EYKRLAKIWS KMKGLKIPKN GDMSALSRNM NAQHMSKVLP PQMLKQIGGM GGLQSLMKQM 480
  481 GSGKDMMGMF GGGDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 2j37W
Description: No description for 2j37W was found.

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