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View Structure Prediction Details

Protein: SRP09_ARATH
Organism: Arabidopsis thaliana
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP09_ARATH.

Description E-value Query
Range
Subject
Range
SRP09_MAIZE - Signal recognition particle 9 kDa protein OS=Zea mays GN=SRP9 PE=3 SV=1
162.0 [0..1] [103..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYIASWDEF VDRSVQLFRA DPESTRYVMK YRHCDGKLVL KVTDNKECLK FKTDQAQEAK  60
   61 KMEKLNNIFF TLMARGPDVD LSEVTGKEQM ETQPAKKGRG RKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.09691
Match: 1914A
Description: SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle