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View Structure Prediction Details

Protein: SPCS2_ARATH
Organism: Arabidopsis thaliana
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|50731377 - gi|50731377|ref|XP_417247.1| PREDICTED: similar to Microsomal signal peptidase 25 kDa subunit (SPase...
248.0 [0..10] [190..139]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKKTESTN KNVKKANLLD HHSIKHILDE SVSDIVTSRG YKEDVRLSNL KLILGTIIIV  60
   61 VALVAQFYNK KFPENRDFLI GCIALYVVLN AVLQLILYTK EKNAILFTYP PEGSFTSTGL 120
  121 VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI 180
  181 KNYAEEEPKK KK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 106.853872
Match: PF06703.2
Description: No description for PF06703.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle