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View Structure Prediction Details

Protein: SPC3A_ARATH
Organism: Arabidopsis thaliana
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC3A_ARATH.

Description E-value Query
Range
Subject
Range
SPC3B_ARATH - Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV=1
240.0 [0..1] [167..1]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTFGYRANA LLTFAVTALA FICAIASFSD KFSNQNPSAE IQILNINRFK KQSHGNDEVS  60
   61 LTLDISADLQ SLFTWNTKQV FVFVAAEYET PKNSLNQVSL WDAIIPAKEH AKFRIQVSNK 120
  121 YRFIDQGQNL RGKDFNLTLH WHVMPKTGKM FADKIVLPGY SLPDAYR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 103.769551
Match: PF04573.3
Description: No description for PF04573.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle