YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MED31_ARATH
Organism: Arabidopsis thaliana
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED31_ARATH.

Description E-value Query
Range
Subject
Range
gi|50934375, gi|... - gi|50934375|ref|XP_476715.1| SOH1-like protein [Oryza sativa (japonica cultivar-group)], gi|50510100...
245.0 [0..9] [191..2]

Back

Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPEEMGDD ASEIPSPPKN TYKDPDGGRQ RFLLELEFIQ CLANPTYIHY LAQNRYFEDE  60
   61 AFIGYLKYLQ YWQRPEYIKF IMYPHCLYFL ELLQNPNFRT AMAHPANKEL AHRQQFYYWK 120
  121 NYRNNRLKHI LPRPLPEPVP PQPPVAPSTS LPPAPSATAA LSPALSPMQY NNMLSKNDTR 180
  181 NMGATGIDRR KRKKGI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 63.69897
Match: PF05669.3
Description: No description for PF05669.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle