| Protein: | SNAA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 381 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNAA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..19] | [379..89] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MFFVKGEGFF YPLFIELRNL IRYQTTRVSN SSRDFNLSQQ HCSCFRPKRR HEAHLSFIGT 60
61 LQYSKQRTIT RAASATIARR QLLLLFDITF SSSSSCYYFQ KKAEKKLNRR RRFDTKYEDA 120
121 ADLLEKARDS YKLAKSWDQA GIAYLKLADC HLKANSLANT YMIMDECMDH EIAEYYESDE 180
181 MFEQAIAYYE TAAEFFQIEE VTTSANQCNL KVAQYASQLE QQSRFMKTQA RHSLNNKLLK 240
241 YGVKGHLLTA GMCHLCKADV VSITNALEKY QDLDPTFSGT RECKFLADLA SAIDEEDIAK 300
301 FTDVSKEIDS VSPLVWAVNH MQLFGCKLCL VLDHDNNVVE GKREVQGQGA GGGCKLYLIE 360
361 GKCILDWNNV YTKRIYNYTN F
|
| Detection Method: |  |
| Confidence: | 35.045757 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.61989900880681 | bayes_pls_golite062009 |
| protein binding | 1.27250271601041 | bayes_pls_golite062009 |
