| Protein: | SEP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..1] | [250..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIVFSN RGKLYEFCST 60
61 SNMLKTLERY QKCSYGSIEV NNKPAKEL
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [89-181] |
1 11 21 31 41 51
| | | | | |
1 ENSYREYLKL KGRYENLQRQ QRNLLGEDLG PLNSKELEQL ERQLDGSLKQ VRCIKTQYML 60
61 DQLSDLQGKE HILLDANRAL SMKLEDMIGV RHH
|
| Detection Method: | |
| Confidence: | 30.886057 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-250] |
1 11 21 31 41 51
| | | | | |
1 HIGGGWEGGD QQNIAYGHPQ AHSQGLYQSL ECDPTLQIGY SHPVCSEQMA VTVQGQSQQG 60
61 NGYIPGWML
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
