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View Structure Prediction Details

Protein: S61G2_ARATH, S61...
Organism: Arabidopsis thaliana
Length: 69 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for S61G2_ARATH, S61....

Description E-value Query
Range
Subject
Range
gi|109500066, gi... - gi|109501036|ref|XP_001057376.1| PREDICTED: similar to Protein transport protein SEC61 gamma subunit...
139.0 [0..1] [68..70]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAIDSVVDP LRDFAKDSIR LVKRCHKPDR KEFTKVAVRT AIGFVVMGFV GFFVKLIFIP  60
   61 INNIIVGAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 1rh5B
Description: The structure of a protein conducting channel
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle