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View Structure Prediction Details

Protein: RU2A_ARATH
Organism: Arabidopsis thaliana
Length: 249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RU2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|50928147, gi|... - gi|50928147|ref|XP_473601.1| OSJNBa0020J04.8 [Oryza sativa (japonica cultivar-group)], gi|38345533|e...
200.0 [0..2] [249..416]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTADLIW KSPHFFNAIK ERELDLRGNK IPVIENLGAT EDQFDTIDLS DNEIVKLENF  60
   61 PYLNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.09691
Match: 1a9nA
Description: Splicesomal U2A' protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [66-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGTLLINNNR ITRINPNLGE FLPKLHSLVL TNNRLVNLVE IDPLASIPKL QYLSLLDNNI  60
   61 TKKANYRLYV IHKLKSLRVL DFIKIKAKER AEAASLFSSK EAEEEVKKVS REEVKKVSET 120
  121 AENPETPKVV APTAEQILAI KAAIINSQTI EEIARLEQAL KFGQVPAGLI IPDPATNDSA 180
  181 PMEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 1xwdC
Description: Crystal Structure of Human Follicle Stimulating Hormone Complexed with its Receptor
Matching Structure (courtesy of the PDB):

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