| Protein: | CP29B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CP29B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..1] | [289..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MAASASSLAL SSFNPKSLPF GVSRPASVSL LSPSLSFKLN SDSVSFSIAA KWNSPASRFA 60
61 RNVAITSEFE VEEDGFADVA PPKEQ
|
| Detection Method: |  |
| Confidence: | 28.30103 |
| Match: | 1fnxH |
| Description: | Hu antigen C (Huc) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [86-289] |
1 11 21 31 41 51
| | | | | |
1 SFSADLKLFV GNLPFNVDSA QLAQLFESAG NVEMVEVIYD KITGRSRGFG FVTMSSVSEV 60
61 EAAAQQFNGY ELDGRPLRVN AGPPPPKRED GFSRGPRSSF GSSGSGYGGG GGSGAGSGNR 120
121 VYVGNLSWGV DDMALESLFS EQGKVVEARV IYDRDSGRSK GFGFVTYDSS QEVQNAIKSL 180
181 DGADLDGRQI RVSEAEARPP RRQY
|
| Detection Method: | |
| Confidence: | 42.522879 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.30587477666777 | bayes_pls_golite062009 |
| nucleic acid binding | 1.22428546892165 | bayes_pls_golite062009 |
| protein binding | 0.88951142240317 | bayes_pls_golite062009 |
| RNA binding | 0.498012521772139 | bayes_pls_golite062009 |
