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View Structure Prediction Details

Protein: RNZC_ARATH
Organism: Arabidopsis thaliana
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNZC_ARATH.

Description E-value Query
Range
Subject
Range
gi|20975607 - gi|20975607|emb|CAD22099.1| RNase Z [Arabidopsis thaliana]
251.0 [0..1] [354..1]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLSSSFPIS PPKIFPSTKH HKPPVITHQL AAQIQSNRRH FVSPVKVSGY FSSISRAIEE  60
   61 EEEYRKARAA VNRKGVELES YAIEGISVGG HETCVIVPEL KCVFDIGRCP SRAIQQKFLF 120
  121 ITHAHLDHIG GLPMYVASRG LYNLEPPKIF VPPSIKEDVE KLLEIHRTMG QVELNVELIP 180
  181 LAVGETYELR NDIVVRPFAT HHVIPSQGYV IYSVRKKLQK QYAHLKGKQI EKIKKSGVEI 240
  241 TDTILSPEIA FTGDTTSEYM LDPRNADALR AKVLITEATF LDESFSTEHA QALGHTHISQ 300
  301 IIENAKWIRS KTVLLTHFSS RYHVEEIREA VLKLQSKVSA KVIPLTEGFR SRYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.522879
Match: 1y44A
Description: Crystal structure of RNase Z
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.411342240547828 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle