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View Structure Prediction Details

Protein: RNS1_ARATH
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555182 - gi|21555182|gb|AAM63798.1| ribonuclease, RNS1 [Arabidopsis thaliana]
291.0 [0..1] [230..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA  60
   61 DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK SWPTLACPSG SGEAFWEHEW 120
  121 EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF 180
  181 TPWVECNRDG SGNSQLYQVY LCVDRSGSGL IECPVFPHGK CGAEIEFPSF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.045757
Match: 1iybA
Description: Crystal Structure of the Nicotiana glutinosa Ribonuclease NW
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.090807370772125 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle