| Protein: | RL38_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 69 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL38_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
138.0 | [0..1] | [69..410] |
|
|
123.0 | [0..2] | [62..42] |
|
|
110.0 | [0..14] | [69..186] |
|
|
107.0 | [0..2] | [69..129] |
|
|
104.0 | [0..1] | [69..1] |
|
|
101.0 | [0..1] | [69..1] |
|
|
101.0 | [0..1] | [69..1] |
|
|
100.0 | [0..17] | [69..366] |
|
|
100.0 | [0..2] | [69..24] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MPKQIHEIKD FLLTARRKDA RSVKIKRSKD IVKFKVRCSR YLYTLCVFDQ EKADKLKQSL 60
61 PPGLSVQDL
|
| Detection Method: |  |
| Confidence: | 49.004365 |
| Match: | PF01781.9 |
| Description: | No description for PF01781.9 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.861 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.799 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.786 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.747 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.729 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.636 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.556 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.526 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.470 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
