| Protein: | RL242_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 163 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL242_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
180.0 | [0..2] | [158..154] |
|
|
179.0 | [0..3] | [116..122] |
|
|
163.0 | [0..3] | [134..1] |
|
|
159.0 | [0..1] | [158..10] |
|
|
157.0 | [0..3] | [131..1] |
|
|
156.0 | [0..3] | [156..1] |
|
|
156.0 | [0..3] | [157..1] |
|
|
155.0 | [0..3] | [158..1] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MVLKTELCRF SGQKIYPGRG IRFIRSDSQV FLFLNSKCKR YFHNKLKPSK LAWTAMYRKQ 60
61 HK
|
| Detection Method: |  |
| Confidence: | 17.39794 |
| Match: | 1ffkR |
| Description: | Ribosomal protein L24e |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [63-163] |
1 11 21 31 41 51
| | | | | |
1 KDAAQEAVKR RRRATKKPYS RSIVGATLEV IQKKRAEKPE VRDAAREAAL REIKERIKKT 60
61 KDEKKAKKVE FASKQQKVKA NFPKAAAASK GPKVGGGGGK R
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.760 | a.118.8 | TPR-like |
| View | Download | 0.758 | a.7.14 | Description not found. |
| View | Download | 0.716 | a.24.3 | Cytochromes |
| View | Download | 0.716 | a.24.3 | Cytochromes |
| View | Download | 0.712 | a.7.16 | Description not found. |
| View | Download | 0.710 | a.29.2 | Bromodomain |
| View | Download | 0.710 | a.29.2 | Bromodomain |
| View | Download | 0.669 | a.29.2 | Bromodomain |
| View | Download | 0.628 | a.118.8 | TPR-like |
| View | Download | 0.231 | b.34.16 | Description not found. |
| View | Download | 0.215 | a.74.1 | Cyclin-like |
| View | Download | 0.206 | b.34.16 | Description not found. |
