YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: R18A3_ARATH
Organism: Arabidopsis thaliana
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for R18A3_ARATH.

Description E-value Query
Range
Subject
Range
gi|50728274 - gi|50728274|ref|XP_416064.1| PREDICTED: similar to ribosomal protein L18a; 60S ribosomal protein L18...
324.0 [0..5] [177..240]

Back

Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGFRFHQYQ VVGRALPTEN DEHPKIYRMK LWGRNEVCAK SKFWYFMRKL KKVKKSNGQM  60
   61 LAINEIFEKN PTTIKNYGIW LRYQSRTGYH NMYKEYRDTT LNGGVEQMYT EMASRHRVRF 120
  121 PCIQIIKTAT VPAKLCKREI TKQFHNSKIK FPLVFRKVRP PSRKLKTTYK ASKPNLFM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 126.0
Match: PF01775.8
Description: No description for PF01775.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle