YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RLA03_ARATH
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLA03_ARATH.

Description E-value Query
Range
Subject
Range
gi|27503344, gi|... - gi|27503344|gb|AAH42268.1| Arbp-prov protein [Xenopus laevis], gi|147904649|ref|NP_001080134.1| acid...
369.0 [0..1] [321..1]

Back

Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKATKAEKK IAYDTKLCQL IDEYTQILVV AADNVGSTQL QNIRKGLRGD SVVLMGKNTM  60
   61 MKRSVRIHSE NSGNTAILNL LPLLQGNVGL IFTKGDLKEV SEEVAKYKVG APARVGLVAP 120
  121 IDVVVQPGNT GLDPSQTSFF QVLNIPTKIN KGTVEIITPV ELIKQGDKVG SSEAALLAKL 180
  181 GIRPFSYGLV VQSVYDNGSV FSPEVLDLTE DQLVEKFASG ISMVTSLALA VSYPTLAAAP 240
  241 HMFINAYKNA LAIAVATDYT FPQAEKVKEF LKDPSKFVVA AAAVSADAGG GSAQAGAAAK 300
  301 VEEKKEESDE EDYEGGFGLF DEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 1jj2G
Description: Ribosomal protein L10
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle