| Protein: | RK21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 220 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RK21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..12] | [203..11] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT 60
61 VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.683 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.566 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.550 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.542 | a.112.1 | Description not found. |
| View | Download | 0.501 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [100-220] |
1 11 21 31 41 51
| | | | | |
1 IFAVIMVGGR QYIVFPGRYL YTQRLKDANV DDQIVLNKVL LVGTKTHTYI GKPVVTNATV 60
61 HAVVESQGLN DKVVVFKYKP KKKYRRNIGH RQPNTRIRIT GITGYEEYPA SPNVAVGEVN 120
121 L
|
| Detection Method: | |
| Confidence: | 36.221849 |
| Match: | 1vs6R |
| Description: | No description for 1vs6R was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.85836545072418 | bayes_pls_golite062009 |
| structural molecule activity | 9.28432670986445 | bayes_pls_golite062009 |
