| Protein: | RK11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 222 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RK11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..1] | [222..1] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MASSSLSTLC SSTSSSLHPN SKLSHSLSAK LSSKANVSVQ FLGKKQSPLL SSTPRFLTVI 60
61 AMAPPKPGGK AKKVVGVIKL ALEAGKATPA PPVGPALGSK GVNIMAFCKD YNARTADKAG 120
121 YIIPVEITVF DDKSFTFILK TPPASVLLLK AAGVEKGSKD PQQDKVGVIT IDQLRTIAAE 180
181 KLPDLNCTTI ESAMRIIAGT AANMGIDIDP PILEPKKKAV LL
|
| Detection Method: |  |
| Confidence: | 55.0 |
| Match: | 1mmsA |
| Description: | Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.48853326749311 | bayes_pls_golite062009 |
| structural molecule activity | 8.91295112573357 | bayes_pls_golite062009 |
| binding | 1.24107701233598 | bayes_pls_golite062009 |
| nucleic acid binding | 0.584475746847092 | bayes_pls_golite062009 |
| RNA binding | 0.569786512924389 | bayes_pls_golite062009 |
| protein binding | 0.566747114628174 | bayes_pls_golite062009 |
| translation regulator activity | 0.37140962719814 | bayes_pls_golite062009 |
