| Protein: | RFL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 885 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
476.0 | [0..1] | [885..1] |
|
Region A: Residues: [1-302] |
1 11 21 31 41 51
| | | | | |
1 MGGCVSVSLS CDREVNQFSQ WLCVSGSYIQ NLSENLASLQ KAMGVLNAKR DDVQGRINRE 60
61 EFTGHRRRLA QVQVWLTRIQ TIENQFNDLL STCNAEIQRL CLCGFCSKNV KMSYLYGKRV 120
121 IVLLREVEGL SSQGVFDIVT EAAPIAEVEE LPIQSTIVGQ DSMLDKVWNC LMEDKVWIVG 180
181 LYGMGGVGKT TLLTQINNKF SKLGGGFDVV IWVVVSKNAT VHKIQKSIGE KLGLVGKNWD 240
241 EKNKNQRALD IHNVLRRKKF VLLLDDIWEK VELKVIGVPY PSGENGCKVA FTTHSKEVCG 300
301 RM
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.470983068319171 | bayes_pls_golite062009 |
| hydrolase activity | 0.0582794297634999 | bayes_pls_golite062009 |
|
Region A: Residues: [303-385] |
1 11 21 31 41 51
| | | | | |
1 GVDNPMEISC LDTGNAWDLL KKKVGENTLG SHPDIPQLAR KVSEKCCGLP LALNVIGETM 60
61 SFKRTIQEWR HATEVLTSAT DFS
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [386-885] |
1 11 21 31 41 51
| | | | | |
1 GMEDEILPIL KYSYDSLNGE DAKSCFLYCS LFPEDFEIRK EMLIEYWICE GFIKEKQGRE 60
61 KAFNQGYDIL GTLVRSSLLL EGAKDKDVVS MHDMVREMAL WIFSDLGKHK ERCIVQAGIG 120
121 LDELPEVENW RAVKRMSLMN NNFEKILGSP ECVELITLFL QNNYKLVDIS MEFFRCMPSL 180
181 AVLDLSENHS LSELPEEISE LVSLQYLDLS GTYIERLPHG LHELRKLVHL KLERTRRLES 240
241 ISGISYLSSL RTLRLRDSKT TLDTGLMKEL QLLEHLELIT TDISSGLVGE LFCYPRVGRC 300
301 IQHIYIRDHW ERPEESVGVL VLPAIHNLCY ISIWNCWMWE IMIEKTPWKK NLTNPNFSNL 360
361 SNVRIEGCDG LKDLTWLLFA PNLINLRVWG CKHLEDIISK EKAASVLEKE ILPFQKLECL 420
421 NLYQLSELKS IYWNALPFQR LRCLDILNNC PKLRKLPLDS KSVVKVEEFV IKYKEKKWIE 480
481 RVEWEDEATQ YRFLPTCRLR
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 2z63A |
| Description: | No description for 2z63A was found. |
