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View Structure Prediction Details

Protein: RER1A_ARATH
Organism: Arabidopsis thaliana
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RER1A_ARATH.

Description E-value Query
Range
Subject
Range
gi|21617987, gi|... - gi|2865177|dbj|BAA24804.1| AtRer1B [Arabidopsis thaliana], gi|21617987|gb|AAM67037.1| AtRer1B [Arabi...
303.0 [0..1] [191..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDESGGDSGS VATPVQQRAH EAWRIYQHYL DKTTPHANYR WIGTLVVALI YCLRVYYIQG  60
   61 FYIIAYGLGI YLLNLLIGFL SPLVDPEAGG VSDGPSLPTR GSDEFKPFIR RLPEFKFWYS 120
  121 MTKAFCIAFL MTFFSVFDVP VFWPILLCYW IVLFVLTMRR QIAHMIKYKY IPFSFGKQKY 180
  181 GGRSSSGSRA D

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 141.065502
Match: PF03248.4
Description: No description for PF03248.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle