| Protein: | RBS2B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 181 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBS2B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..1] | [181..1] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MASSMFSSTA VVTSPAQATM VAPFTGLKSS ASFPVTRKAN NDITSITSNG GRVSCMKVWP 60
61 PI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.631 | N/A | N/A | b.34.7 | DNA-binding domain of retroviral integrase |
| View | Download | 0.455 | N/A | N/A | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.347 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.341 | N/A | N/A | b.34.2 | SH3-domain |
| View | Download | 0.323 | N/A | N/A | b.34.2 | SH3-domain |
|
Region A: Residues: [63-181] |
1 11 21 31 41 51
| | | | | |
1 GKKKFETLSY LPDLSDVELA KEVDYLLRNK WIPCVEFELE HGFVYREHGN TPGYYDGRYW 60
61 TMWKLPLFGC TDSAQVLKEV EECKKEYPGA FIRIIGFDNT RQVQCISFIA YKPPSFTEA
|
| Detection Method: | |
| Confidence: | 57.522879 |
| Match: | 1ir1S |
| Description: | Ribulose 1,5-bisphosphate carboxylase-oxygenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribulose-bisphosphate carboxylase activity | 11.824892250298 | bayes_pls_golite062009 |
| catalytic activity | 0.424959044318554 | bayes_pls_golite062009 |
| binding | 0.038830520724571 | bayes_pls_golite062009 |
